PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla006211
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family ERF
Protein Properties Length: 192aa    MW: 20375.3 Da    PI: 7.1832
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla006211genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.32.9e-161865355
        AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               ++G+r  +++g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+g
  Cla006211 18 FRGIR--SRSGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALSLKG 65
               79995..678*********843...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.5591773IPR001471AP2/ERF domain
SMARTSM003804.5E-281779IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-181875IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-261875IPR001471AP2/ERF domain
CDDcd000181.09E-171875No hitNo description
PRINTSPR003672.2E-61829IPR001471AP2/ERF domain
PfamPF008472.3E-91965IPR001471AP2/ERF domain
PRINTSPR003672.2E-65575IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MSDNNNNSPG RPGRHHLFRG IRSRSGKWVS EIREPRKTTR IWLGTYPTPE MAAAAYDVAA  60
LSLKGPHASL NFPDSRNSYR IPLSTSASDI RAAAAIAAAS RNLNNNNPGQ ASPSAATAAD  120
SSHTDGGGPS SHATADSSGK FVDEEELLNM PNLLVDMAEG MLVSPPRMKS PSSDDSPTHS  180
SQGDDGLWSY SK
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818483e-60LN681848.1 Cucumis melo genomic scaffold, anchoredscaffold00006.
GenBankLN7132603e-60LN713260.1 Cucumis melo genomic chromosome, chr_6.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004140856.11e-81PREDICTED: ethylene-responsive transcription factor ERF025
SwissprotQ9FJ901e-49ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A0A0L6E01e-81A0A0A0L6E0_CUCSA; Uncharacterized protein
STRINGVIT_16s0100g00400.t018e-62(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-38ERF family protein